Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | C9344_16080 | Not Available | Negative | 3278152 - 3279069 | 32543.0 |
| beta-glucosidase bglx | C9344_16085 | Not Available | Negative | 3279280 - 3281577 | 83538.7 |
| d-lactate dehydrogenase | C9344_16090 | Not Available | Positive | 3281773 - 3283488 | 64680.0 |
| d-alanyl-d-alanine endopeptidase | C9344_16095 | Not Available | Negative | 3283526 - 3284458 | 33855.3 |
| yip1 family protein | C9344_16100 | Not Available | Negative | 3284632 - 3285219 | 21692.0 |
| deda family protein | C9344_16105 | Not Available | Positive | 3285389 - 3285967 | 21422.9 |
| sdr family oxidoreductase | C9344_16110 | Not Available | Negative | 3286097 - 3286858 | 26979.4 |
| multidrug resistance outer membrane protein mdtq | C9344_16115 | Not Available | Negative | 3286911 - 3288437 | 55638.3 |
| protein yohp | C9344_16120 | Not Available | Positive | 3288571 - 3288654 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | C9344_16125 | Not Available | Negative | 3289042 - 3289992 | 35339.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





