Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impact family member yigz | C9344_14665 | Not Available | Positive | 3007566 - 3008180 | 21758.1 |
| trk system potassium uptake protein trkh | C9344_14670 | Not Available | Positive | 3008219 - 3009670 | 52962.9 |
| protoporphyrinogen oxidase | C9344_14675 | Not Available | Positive | 3009682 - 3010227 | 21257.5 |
| duf987 family protein | C9344_14680 | Not Available | Positive | 3010318 - 3010412 | 3380.12 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9344_14685 | Not Available | Positive | 3010575 - 3010949 | 13767.4 |
| toxin | C9344_14690 | Not Available | Positive | 3010996 - 3011370 | 14118.0 |
| hypothetical protein | C9344_14695 | Not Available | Positive | 3011367 - 3011858 | 18187.8 |
| duf957 domain-containing protein | C9344_14700 | Not Available | Positive | 3011870 - 3012067 | 7379.73 |
| duf4942 domain-containing protein | C9344_14705 | Not Available | Positive | 3012152 - 3012994 | 32552.1 |
| Trna-ser | Not Available | Not Available | Positive | 3013144 - 3013231 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





