Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | C9344_13490 | Not Available | Positive | 2761076 - 2763067 | 74372.2 |
| cytochrome bo(3) ubiquinol oxidase subunit 3 | C9344_13495 | Not Available | Positive | 2763057 - 2763671 | 22624.0 |
| cytochrome bo(3) ubiquinol oxidase subunit 4 | C9344_13500 | Not Available | Positive | 2763671 - 2764000 | 12030.2 |
| protoheme ix farnesyltransferase | C9344_13505 | Not Available | Positive | 2764012 - 2764902 | 32250.4 |
| duf1778 domain-containing protein | C9344_13510 | Not Available | Positive | 2765087 - 2765398 | 11358.7 |
| gnat family n-acetyltransferase | C9344_13515 | Not Available | Positive | 2765382 - 2765924 | 19806.2 |
| sel1 repeat family protein | C9344_13520 | Not Available | Negative | 2765980 - 2766915 | 34695.5 |
| mfs transporter | C9344_13525 | Not Available | Positive | 2767323 - 2768687 | 48788.9 |
| yajq family cyclic di-gmp-binding protein | C9344_13530 | Not Available | Negative | 2768815 - 2769306 | 18344.9 |
| 2-dehydropantoate 2-reductase | C9344_13535 | Not Available | Positive | 2769474 - 2770385 | 33948.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





