Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tric cation channel family protein | C9344_13135 | Not Available | Negative | 2682519 - 2683142 | 22129.1 |
| cobalamin-binding protein | C9344_13140 | Not Available | Negative | 2683180 - 2683980 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | C9344_13145 | Not Available | Negative | 2683973 - 2684671 | 24369.5 |
| deoxyguanosinetriphosphate triphosphohydrolase | C9344_13150 | Not Available | Positive | 2684755 - 2686272 | 59358.2 |
| serine endoprotease degp | C9344_13155 | Not Available | Positive | 2686402 - 2687826 | 49313.2 |
| cdar family transcriptional regulator | C9344_13160 | Not Available | Positive | 2688004 - 2689134 | 42619.8 |
| duf3461 family protein | C9344_13165 | Not Available | Negative | 2689223 - 2689609 | 15097.0 |
| hypothetical protein | C9344_13170 | Not Available | Positive | 2689655 - 2689852 | 7766.62 |
| phosphodiesterase yaei | C9344_13175 | Not Available | Negative | 2689771 - 2690583 | 29924.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C9344_13180 | Not Available | Negative | 2690638 - 2691462 | 29893.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





