Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C9344_12980 | Not Available | Positive | 2648436 - 2649362 | 34649.2 |
| inner membrane transport permease yadh | C9344_12985 | Not Available | Positive | 2649359 - 2650129 | 28517.9 |
| pts sugar transporter subunit iia | C9344_12990 | Not Available | Positive | 2650234 - 2650674 | 16527.0 |
| polysaccharide deacetylase family protein | C9344_12995 | Not Available | Positive | 2650738 - 2651967 | 46327.8 |
| aspartate 1-decarboxylase | C9344_13000 | Not Available | Negative | 2651971 - 2652351 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | C9344_13005 | Not Available | Positive | 2652625 - 2653527 | 34674.9 |
| pantoate--beta-alanine ligase | C9344_13010 | Not Available | Negative | 2653601 - 2654452 | 31581.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | C9344_13015 | Not Available | Negative | 2654464 - 2655258 | 28109.0 |
| fimbrial protein staf | C9344_13025 | Not Available | Negative | 2656698 - 2657294 | 21451.7 |
| fimbrial-like protein yadl | C9344_13030 | Not Available | Negative | 2657321 - 2657923 | 20898.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





