Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspe | C9344_12880 | Not Available | Negative | 2621623 - 2623008 | 50621.4 |
| prepilin peptidase-dependent pilin | C9344_12885 | Not Available | Negative | 2623018 - 2623458 | 15631.7 |
| nicotinate-nucleotide pyrophosphorylase | C9344_12890 | Not Available | Negative | 2623661 - 2624554 | 32764.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | C9344_12895 | Not Available | Positive | 2624642 - 2625193 | 20537.2 |
| beta-lactamase regulator ampe | C9344_12900 | Not Available | Positive | 2625190 - 2626044 | 32151.9 |
| aromatic amino acid transporter arop | C9344_12905 | Not Available | Negative | 2626087 - 2627457 | 49579.9 |
| pyruvate dehydrogenase complex repressor | C9344_12910 | Not Available | Positive | 2628001 - 2628765 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | C9344_12915 | Not Available | Positive | 2628926 - 2631589 | 99674.1 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | C9344_12920 | Not Available | Positive | 2631604 - 2633496 | 66099.8 |
| dihydrolipoyl dehydrogenase | C9344_12925 | Not Available | Positive | 2633821 - 2635245 | 50691.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





