Escherichia coli strain FWSEC0623

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0623 is a Gram-negative, rod-shaped bacterium characterized by its ability to exist in pairs or singles. As a facultative anaerobe, it can thrive in both the presence and absence of oxygen, with an optimal growth temperature of 37°C, falling within the mesophilic temperature range. This strain possesses flagella, enabling mobility, and is known to have a biotic relationship as a free-living organism. E. coli FWSEC0623 is associated with a wide variety of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals, birds, and even some plants. This extensive host range indicates its adaptability and potential ecological significance. The strain is linked to numerous health effects, particularly in humans, where it is implicated in various conditions such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. Other health impacts include septicemia, diarrhea, and complications such as hemolytic uremic syndrome (HUS) and renal failure. The strain's pathogenicity highlights its role in clinical settings, where it can lead to severe diseases such as colibacillosis and gastrointestinal disease. Understanding the traits of E. coli FWSEC0623 sheds light on its ecological interactions and pathogenic potential, particularly in its diverse relationships with both animal and plant hosts. The strain's ability to cause a wide array of diseases underscores the importance of monitoring its presence in various ecosystems, as it can significantly affect both human health and animal welfare.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0623

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0623
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0623 plasmid unnamed3

Gene Summary

Adenine Count

1296365 bp

Thymine Count

1293300 bp

Guanine Count

1317513 bp

Cytosine Count

1312638 bp

Genome Length

5233962 bp

Protein-coding Genes

4736 genes

Non-Coding Genes

441 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Pyruvate formate-lyaseC9343_09135Not AvailablePositive1914583 - 191686585355.0
AttlNot AvailableNot AvailablePositive1917059 - 1917071Not Available
Dna-binding transcriptional regulatorC9343_09140Not AvailableNegative1917185 - 19174068394.95
Tail proteinC9343_09145Not AvailableNegative1917482 - 191865142694.8
Tail proteinC9343_09150Not AvailableNegative1918648 - 191911217141.5
Tail length determinatorC9343_09155Not AvailableNegative1919126 - 192156785529.6
Tail proteinC9343_09160Not AvailableNegative1921557 - 19216794601.41
Tail proteinC9343_09165Not AvailableNegative1921712 - 192202611104.4
Major tail tube proteinC9343_09170Not AvailableNegative1922081 - 192259918850.6
Tail sheath proteinC9343_09175Not AvailableNegative1922612 - 192380543256.1

Displaying genes 1 – 10 of 5179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total