Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine kinase | C9343_00775 | Not Available | Positive | 175364 - 176305 | 33687.0 |
| pseudouridine-5'-phosphate glycosidase | C9343_00780 | Not Available | Positive | 176293 - 177231 | 32881.7 |
| nupc/nupg family nucleoside cnt transporter | C9343_00785 | Not Available | Positive | 177325 - 178575 | 43434.4 |
| transcriptional regulator yeil | C9343_00790 | Not Available | Negative | 178646 - 179344 | 26866.6 |
| sugar kinase | C9343_00805 | Not Available | Negative | 181821 - 182909 | 39666.5 |
| endonuclease | C9343_00810 | Not Available | Negative | 182912 - 183769 | 31493.3 |
| yeih family protein | C9343_00815 | Not Available | Negative | 183843 - 184892 | 36884.3 |
| lysr family transcriptional regulator | C9343_00820 | Not Available | Positive | 184991 - 185872 | 32725.7 |
| lysine-specific permease | C9343_00825 | Not Available | Positive | 186077 - 187546 | 53579.0 |
| catecholate siderophore receptor cira | C9343_00835 | Not Available | Positive | 187839 - 189830 | 73933.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





