Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | C9343_26910 | Not Available | Positive | 5159038 - 5160042 | 37183.5 |
| hypothetical protein | C9343_26920 | Not Available | Negative | 5160922 - 5160986 | 2433.99 |
| phopq-regulated protein | C9343_26925 | Not Available | Positive | 5161244 - 5162731 | 55153.4 |
| hypothetical protein | C9343_26935 | Not Available | Positive | 5163809 - 5163994 | 6709.07 |
| alpha/beta hydrolase | C9343_26945 | Not Available | Negative | 5164248 - 5165108 | 31759.0 |
| hypothetical protein | C9343_26950 | Not Available | Positive | 5165034 - 5165219 | 7194.92 |
| antitoxin | C9343_26965 | Not Available | Positive | 5165768 - 5166025 | 9279.11 |
| mrna interferase pemk | C9343_26970 | Not Available | Positive | 5166027 - 5166359 | 11862.5 |
| conjugal transfer protein | C9343_26985 | Not Available | Negative | 5167231 - 5169421 | 82336.5 |
| conjugal transfer protein trad | C9343_26990 | Not Available | Negative | 5169424 - 5169744 | 11948.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





