Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | C9343_26190 | Not Available | Negative | 5041788 - 5043590 | 69161.0 |
| lysozyme family protein | C9343_26195 | Not Available | Negative | 5043583 - 5044005 | 16012.6 |
| type vi secretion protein | C9343_26200 | Not Available | Negative | 5044015 - 5044527 | 18940.6 |
| type vi secretion system contractile sheath large subunit | C9343_26205 | Not Available | Negative | 5044537 - 5046015 | 55336.4 |
| type vi secretion system contractile sheath small subunit | C9343_26210 | Not Available | Negative | 5046018 - 5046494 | 18004.3 |
| hypothetical protein | C9343_26215 | Not Available | Negative | 5047032 - 5047253 | 8450.99 |
| is110 family transposase | C9343_26230 | Not Available | Positive | 5049589 - 5049896 | 11123.7 |
| dotu family type iv/vi secretion system protein | C9343_26235 | Not Available | Positive | 5050408 - 5051010 | 23377.4 |
| type vi secretion protein | C9343_26240 | Not Available | Positive | 5051017 - 5054421 | 131824.0 |
| type vi secretion system atpase tssh | C9343_26245 | Not Available | Positive | 5054425 - 5056956 | 94367.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





