Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9343_26015 | Not Available | Positive | 5010726 - 5010986 | 9992.82 |
| hypothetical protein | C9343_26020 | Not Available | Positive | 5011287 - 5011871 | 21998.6 |
| type iv conjugative transfer system coupling protein trad | C9343_26025 | Not Available | Positive | 5011927 - 5014080 | 81415.5 |
| trna(fmet)-specific endonuclease vapc | C9343_26030 | Not Available | Negative | 5014089 - 5014487 | 14863.0 |
| antitoxin | C9343_26035 | Not Available | Negative | 5014487 - 5014717 | 8630.19 |
| conjugative transfer relaxase/helicase trai | C9343_26040 | Not Available | Positive | 5014796 - 5020066 | 191936.0 |
| hypothetical protein | C9343_26045 | Not Available | Positive | 5020115 - 5020546 | 15890.5 |
| type-f conjugative transfer system pilin acetylase trax | C9343_26050 | Not Available | Positive | 5020568 - 5021305 | 27294.9 |
| fertility inhibition protein fino | C9343_26055 | Not Available | Positive | 5021360 - 5021920 | 21235.8 |
| hypothetical protein | C9343_26060 | Not Available | Positive | 5022055 - 5022267 | 8275.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





