Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein traf | C9343_25960 | Not Available | Positive | 5002258 - 5003001 | 28102.8 |
| hypothetical protein | C9343_25970 | Not Available | Negative | 5003339 - 5003674 | 12844.3 |
| type-f conjugative transfer system pilin chaperone traq | C9343_25975 | Not Available | Positive | 5003757 - 5004038 | 10820.3 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | C9343_25980 | Not Available | Positive | 5004025 - 5004561 | 19371.4 |
| conjugal transfer protein trbj | C9343_25985 | Not Available | Positive | 5004491 - 5004865 | 13984.0 |
| conjugal transfer protein trbf | C9343_25990 | Not Available | Positive | 5004786 - 5005211 | 16988.9 |
| conjugal transfer protein trah | C9343_25995 | Not Available | Positive | 5005198 - 5006571 | 50556.6 |
| conjugal transfer protein trag | C9343_26000 | Not Available | Positive | 5006568 - 5009390 | 102671.0 |
| entry exclusion protein | C9343_26005 | Not Available | Positive | 5009406 - 5009903 | 19046.0 |
| complement resistance protein trat | C9343_26010 | Not Available | Positive | 5009935 - 5010666 | 25998.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





