Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication endonuclease | C9343_25560 | Not Available | Positive | 4950293 - 4951690 | 52903.0 |
| dna-binding protein | C9343_25565 | Not Available | Positive | 4951697 - 4952320 | 23884.8 |
| duf4222 domain-containing protein | C9343_25570 | Not Available | Negative | 4952700 - 4952891 | 7341.8 |
| hypothetical protein | C9343_25580 | Not Available | Negative | 4954156 - 4954395 | 9232.35 |
| host specificity protein j | C9343_25585 | Not Available | Positive | 4954414 - 4955724 | 47848.2 |
| replication endonuclease | C9343_25590 | Not Available | Positive | 4955725 - 4956681 | 36151.1 |
| hypothetical protein | C9343_25595 | Not Available | Positive | 4956758 - 4957029 | 10202.8 |
| is4-like element is421 family transposase | C9343_25600 | Not Available | Negative | 4957203 - 4958297 | 40163.3 |
| is3-like element is2 family transposase | C9343_25605 | Not Available | Positive | 4958323 - 4959551 | 46402.7 |
| hypothetical protein | C9343_25610 | Not Available | Negative | 4959563 - 4959779 | 8038.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





