Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9343_25425 | Not Available | Negative | 4933776 - 4934417 | 24451.1 |
| holin | C9343_25430 | Not Available | Negative | 4934421 - 4934636 | 7992.79 |
| phage minor tail protein l | C9343_25440 | Not Available | Negative | 4936408 - 4936523 | 4461.19 |
| phage tail protein | C9343_25445 | Not Available | Negative | 4936523 - 4936852 | 12531.0 |
| phage tail tape measure protein | C9343_25450 | Not Available | Negative | 4936849 - 4937985 | 40727.1 |
| hypothetical protein | C9343_25455 | Not Available | Negative | 4938167 - 4938706 | 20577.6 |
| dna-binding transcriptional activator tdcr | C9343_25460 | Not Available | Negative | 4938962 - 4939306 | 13574.4 |
| hypothetical protein | C9343_25470 | Not Available | Negative | 4939660 - 4939722 | 2421.92 |
| transposase | C9343_25475 | Not Available | Negative | 4939723 - 4940866 | 43430.2 |
| phage tail tape measure protein | C9343_25485 | Not Available | Positive | 4941367 - 4942983 | 56605.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





