Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage replisome organizer | C9343_25315 | Not Available | Positive | 4919620 - 4920593 | 36469.5 |
| hypothetical protein | C9343_25320 | Not Available | Positive | 4920594 - 4920651 | 2206.66 |
| hypothetical protein | C9343_25325 | Not Available | Negative | 4920662 - 4920910 | 9227.0 |
| helix-turn-helix domain-containing protein | C9343_25330 | Not Available | Negative | 4920920 - 4921546 | 24198.4 |
| hypothetical protein | C9343_25335 | Not Available | Negative | 4921787 - 4921969 | 7208.66 |
| phage tail protein | C9343_25340 | Not Available | Positive | 4923027 - 4923216 | 6998.1 |
| phage tail protein | C9343_25345 | Not Available | Positive | 4923224 - 4923964 | 25811.2 |
| phage minor tail protein g | C9343_25350 | Not Available | Positive | 4923980 - 4924402 | 15608.4 |
| phage tail assembly protein t | C9343_25355 | Not Available | Positive | 4924384 - 4924818 | 16092.0 |
| phage tail tape measure protein | C9343_25360 | Not Available | Positive | 4924811 - 4925196 | 13579.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





