Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | C9343_25215 | Not Available | Positive | 4904381 - 4905147 | 27626.3 |
| chromosome partitioning protein | C9343_25220 | Not Available | Positive | 4905152 - 4905463 | 11242.5 |
| carboxylate--amine ligase | C9343_25225 | Not Available | Positive | 4905527 - 4905859 | 12687.3 |
| hypothetical protein | C9343_25230 | Not Available | Positive | 4905856 - 4906263 | 15671.9 |
| phage portal protein | C9343_25235 | Not Available | Negative | 4906748 - 4907265 | 18623.3 |
| phage tail tape measure protein | C9343_25240 | Not Available | Positive | 4907266 - 4909683 | 85853.0 |
| phage tail protein | C9343_25245 | Not Available | Positive | 4909696 - 4910131 | 16757.1 |
| rhs repeat protein | C9343_25250 | Not Available | Negative | 4910132 - 4912931 | 104600.0 |
| terminase | C9343_25255 | Not Available | Negative | 4912933 - 4913174 | 8820.5 |
| phage major capsid protein, p2 family | C9343_25260 | Not Available | Negative | 4913220 - 4914272 | 39256.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





