Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspg | C9343_24630 | Not Available | Positive | 4821297 - 4821752 | 16707.8 |
| type ii secretion system protein gsph | C9343_24635 | Not Available | Positive | 4821756 - 4822319 | 21245.8 |
| type ii secretion system protein gspi | C9343_24640 | Not Available | Positive | 4822316 - 4822687 | 13606.2 |
| type ii secretion system protein gspj | C9343_24645 | Not Available | Positive | 4822684 - 4823289 | 22645.8 |
| general secretion pathway protein gspk | C9343_24650 | Not Available | Positive | 4823286 - 4824248 | 35615.1 |
| type ii secretion system protein gspl | C9343_24655 | Not Available | Positive | 4824245 - 4825062 | 31087.4 |
| hydrolase | C9343_24660 | Not Available | Negative | 4825161 - 4825787 | 23119.6 |
| mfs transporter | C9343_24665 | Not Available | Positive | 4826101 - 4827249 | 41462.2 |
| amino acid permease | C9343_24670 | Not Available | Positive | 4827459 - 4828889 | 52527.6 |
| lysr family transcriptional regulator | C9343_24675 | Not Available | Negative | 4828890 - 4829798 | 34260.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





