Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | C9343_24480 | Not Available | Negative | 4801179 - 4801535 | 13490.2 |
| yjbq family protein | C9343_24485 | Not Available | Negative | 4801539 - 4801955 | 15656.8 |
| type ii secretion system protein gspd | C9343_24490 | Not Available | Negative | 4802188 - 4803829 | 59654.4 |
| type ii secretion system protein gspc | C9343_24495 | Not Available | Negative | 4803871 - 4804698 | 30845.1 |
| hypothetical protein | C9343_24500 | Not Available | Negative | 4804835 - 4805245 | 14981.5 |
| prepilin peptidase | C9343_24505 | Not Available | Negative | 4805286 - 4806044 | 27504.2 |
| phosphoesterase | C9343_24510 | Not Available | Negative | 4806154 - 4808022 | 70627.0 |
| hypothetical protein | C9343_24515 | Not Available | Negative | 4808176 - 4808237 | 2293.74 |
| repb family plasmid replication initiator protein | C9343_24520 | Not Available | Positive | 4808244 - 4808498 | 10126.2 |
| dna-binding response regulator | C9343_24525 | Not Available | Positive | 4808575 - 4808859 | 10623.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





