Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 4695083 - 4695170 | Not Available |
| duf4942 domain-containing protein | C9343_23780 | Not Available | Negative | 4695320 - 4696162 | 32520.0 |
| duf957 domain-containing protein | C9343_23785 | Not Available | Negative | 4696247 - 4696444 | 7357.67 |
| hypothetical protein | C9343_23790 | Not Available | Negative | 4696456 - 4696944 | 17956.4 |
| toxin | C9343_23795 | Not Available | Negative | 4696941 - 4697318 | 14072.8 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9343_23800 | Not Available | Negative | 4697408 - 4697776 | 13680.1 |
| antitoxin of toxin-antitoxin stability system | C9343_23805 | Not Available | Negative | 4697826 - 4698470 | 25073.2 |
| duf987 domain-containing protein | C9343_23810 | Not Available | Negative | 4698485 - 4698706 | 8411.2 |
| dna repair protein radc | C9343_23815 | Not Available | Negative | 4698775 - 4699251 | 17690.4 |
| antirestriction protein | C9343_23820 | Not Available | Negative | 4699267 - 4699752 | 18080.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





