Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | C9343_22475 | Not Available | Positive | 4485812 - 4486927 | 42214.0 |
| oxidoreductase | C9343_22480 | Not Available | Negative | 4486981 - 4487946 | 35663.2 |
| ring-hydroxylating oxygenase subunit alpha | C9343_22485 | Not Available | Negative | 4488002 - 4489126 | 42563.0 |
| bcct family transporter yeav | C9343_22490 | Not Available | Negative | 4489158 - 4490768 | 58705.5 |
| leucine efflux protein leue | C9343_22505 | Not Available | Positive | 4493256 - 4493894 | 23232.0 |
| duf1971 domain-containing protein | C9343_22510 | Not Available | Positive | 4494067 - 4494249 | 6822.07 |
| type i toxin-antitoxin system hok family toxin | C9343_22515 | Not Available | Negative | 4494357 - 4494509 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | C9343_22525 | Not Available | Negative | 4494774 - 4495508 | 27997.3 |
| hypothetical protein | C9343_22530 | Not Available | Positive | 4495399 - 4495626 | 8054.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | C9343_22535 | Not Available | Negative | 4495583 - 4497295 | 63966.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





