Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystine abc transporter substrate-binding protein | C9343_22055 | Not Available | Positive | 4409504 - 4410304 | 28996.8 |
| d-cysteine desulfhydrase | C9343_22060 | Not Available | Positive | 4410409 - 4411395 | 35143.3 |
| amino acid abc transporter permease | C9343_22065 | Not Available | Positive | 4411410 - 4412078 | 24802.7 |
| l-cystine abc transporter atp-binding protein yecc | C9343_22070 | Not Available | Positive | 4412075 - 4412827 | 27705.8 |
| transcriptional regulator sdia | C9343_22075 | Not Available | Positive | 4413057 - 4413779 | 28017.7 |
| duf2594 family protein | C9343_22080 | Not Available | Negative | 4413847 - 4414071 | 8239.04 |
| hypothetical protein | C9343_22085 | Not Available | Negative | 4414058 - 4414234 | 6720.31 |
| transcriptional regulator | C9343_22090 | Not Available | Negative | 4414272 - 4414388 | 4233.23 |
| dna-binding response regulator | C9343_22095 | Not Available | Positive | 4414530 - 4415186 | 23894.1 |
| excinuclease abc subunit c | C9343_22100 | Not Available | Positive | 4415183 - 4417015 | 68192.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





