Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate transporter | C9343_21940 | Not Available | Negative | 4383235 - 4384551 | 47789.1 |
| inverse autotransporter adhesin-like protein yeej | C9343_21950 | Not Available | Negative | 4386180 - 4393256 | 249105.0 |
| hypothetical protein | C9343_21955 | Not Available | Positive | 4393946 - 4394821 | 34136.9 |
| is110 family transposase | C9343_21960 | Not Available | Positive | 4395015 - 4395983 | 35842.9 |
| alpa family transcriptional regulator | C9343_21965 | Not Available | Positive | 4396142 - 4396360 | 8296.14 |
| hypothetical protein | C9343_21970 | Not Available | Positive | 4396442 - 4396732 | 12033.4 |
| hypothetical protein | C9343_21975 | Not Available | Positive | 4396777 - 4397073 | 11366.0 |
| dna-binding protein | C9343_21980 | Not Available | Positive | 4397147 - 4397392 | 9933.27 |
| hypothetical protein | C9343_21995 | Not Available | Negative | 4398966 - 4399025 | 2293.74 |
| sos response-associated peptidase | C9343_22000 | Not Available | Negative | 4399109 - 4399780 | 25098.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





