Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | C9343_21735 | Not Available | Positive | 4337899 - 4338435 | 19732.4 |
| u32 family peptidase | C9343_21740 | Not Available | Positive | 4338508 - 4340469 | 72773.0 |
| duf2554 family protein | C9343_21745 | Not Available | Negative | 4340561 - 4340791 | 8709.32 |
| mrna interferase hica | C9343_21750 | Not Available | Positive | 4341013 - 4341189 | 6782.3 |
| antitoxin hicb | C9343_21755 | Not Available | Positive | 4341235 - 4341651 | 15247.5 |
| plp-dependent aminotransferase family protein | C9343_21760 | Not Available | Positive | 4341730 - 4343136 | 52827.9 |
| extracellular solute-binding protein | C9343_21765 | Not Available | Positive | 4343381 - 4344526 | 42297.4 |
| abc transporter atp-binding protein | C9343_21770 | Not Available | Positive | 4344544 - 4345557 | 37044.9 |
| abc transporter permease | C9343_21775 | Not Available | Positive | 4345558 - 4346499 | 34397.2 |
| abc transporter permease | C9343_21780 | Not Available | Positive | 4346489 - 4347283 | 28723.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





