Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system yeeu family antitoxin | C9343_21580 | Not Available | Positive | 4309887 - 4310264 | 13920.4 |
| toxin | C9343_21585 | Not Available | Positive | 4310314 - 4310691 | 14075.0 |
| hypothetical protein | C9343_21590 | Not Available | Positive | 4310688 - 4311176 | 18323.1 |
| duf957 domain-containing protein | C9343_21595 | Not Available | Positive | 4311188 - 4311385 | 7479.81 |
| hypothetical protein | C9343_21600 | Not Available | Positive | 4312580 - 4313893 | 44484.3 |
| duf262 domain-containing protein | C9343_21605 | Not Available | Negative | 4313952 - 4314806 | 32822.7 |
| duf1127 domain-containing protein | C9343_21610 | Not Available | Negative | 4314904 - 4315068 | 6729.11 |
| plp-dependent aminotransferase family protein | C9343_21615 | Not Available | Positive | 4315245 - 4316657 | 53138.9 |
| rpn family recombination-promoting nuclease/putative transposase | C9343_21620 | Not Available | Negative | 4316900 - 4317844 | 36782.6 |
| hypothetical protein | C9343_21625 | Not Available | Negative | 4317841 - 4318053 | 7784.35 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





