Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | C9343_20985 | Not Available | Positive | 4204396 - 4206021 | 57685.4 |
| carbamate kinase-like protein yqea | C9343_20990 | Not Available | Negative | 4206062 - 4206994 | 33072.9 |
| d-phenylhydantoinase | C9343_20995 | Not Available | Negative | 4207042 - 4208427 | 51046.2 |
| ygey family selenium metabolism-linked hydrolase | C9343_21000 | Not Available | Negative | 4208480 - 4209691 | 44806.4 |
| plp-dependent lyase/thiolase | C9343_21005 | Not Available | Negative | 4209749 - 4210945 | 43330.1 |
| knotted carbamoyltransferase ygew | C9343_21010 | Not Available | Negative | 4211003 - 4212190 | 44058.7 |
| hypothetical protein | C9343_21020 | Not Available | Negative | 4213100 - 4213161 | 2293.74 |
| duf898 domain-containing protein | C9343_21025 | Not Available | Positive | 4213292 - 4214488 | 44832.0 |
| valine--trna ligase | C9343_21030 | Not Available | Negative | 4214542 - 4217397 | 108198.0 |
| dna polymerase iii subunit chi | C9343_21035 | Not Available | Negative | 4217397 - 4217840 | 16574.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





