Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease v | C9343_19980 | Not Available | Negative | 3990047 - 3990718 | 24673.9 |
| uroporphyrinogen decarboxylase | C9343_19985 | Not Available | Negative | 3990728 - 3991792 | 39250.4 |
| nad(+) diphosphatase | C9343_19990 | Not Available | Negative | 3991832 - 3992605 | 29690.6 |
| sigma d regulator | C9343_19995 | Not Available | Positive | 3992700 - 3993176 | 18243.9 |
| phosphomethylpyrimidine synthase thic | C9343_20000 | Not Available | Positive | 3993410 - 3995305 | 70852.4 |
| thiamine phosphate synthase | C9343_20005 | Not Available | Positive | 3995305 - 3995940 | 23016.6 |
| thiamine biosynthesis protein this | C9343_20010 | Not Available | Positive | 3995933 - 3996688 | 26971.4 |
| sulfur carrier protein this | C9343_20015 | Not Available | Positive | 3996672 - 3996872 | 7311.76 |
| thiazole synthase | C9343_20020 | Not Available | Positive | 3996874 - 3997644 | 26871.6 |
| 2-iminoacetate synthase thih | C9343_20025 | Not Available | Positive | 3997641 - 3998774 | 43338.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





