Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C9343_19460 | Not Available | Negative | 3894839 - 3895585 | 28278.8 |
| glycosyl hydrolase 25 family protein | C9343_19465 | Not Available | Negative | 3895637 - 3896455 | 31584.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | C9343_19470 | Not Available | Negative | 3896520 - 3897320 | 28663.3 |
| hydroxyethylthiazole kinase | C9343_19475 | Not Available | Negative | 3897317 - 3898105 | 27253.6 |
| transcriptional regulator | C9343_19480 | Not Available | Negative | 3898328 - 3898600 | 10134.5 |
| nickel/cobalt efflux protein rcna | C9343_19485 | Not Available | Positive | 3898722 - 3899567 | 31425.2 |
| nickel/cobalt homeostasis protein rcnb | C9343_19490 | Not Available | Positive | 3899789 - 3900127 | 12465.9 |
| putative fimbrial-like adhesin protein | C9343_19495 | Not Available | Negative | 3900209 - 3901243 | 36886.9 |
| outer membrane usher protein yehb | C9343_19500 | Not Available | Negative | 3901259 - 3903739 | 92287.0 |
| fimbrial assembly protein | C9343_19505 | Not Available | Negative | 3903755 - 3904429 | 24838.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





