Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| miniconductance mechanosensitive channel ybdg | C9343_19130 | Not Available | Positive | 3827186 - 3828433 | 46605.5 |
| aromatic amino acid transporter arop | C9343_19135 | Not Available | Negative | 3828501 - 3829877 | 50648.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | C9343_19140 | Not Available | Negative | 3829979 - 3833122 | 114744.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | C9343_19145 | Not Available | Negative | 3833134 - 3834357 | 44412.5 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | C9343_19150 | Not Available | Negative | 3834373 - 3834705 | 12251.9 |
| efflux transporter outer membrane subunit | C9343_19155 | Not Available | Negative | 3834729 - 3836111 | 50773.0 |
| copper response regulator transcription factor cusr | C9343_19160 | Not Available | Positive | 3836268 - 3836951 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | C9343_19165 | Not Available | Positive | 3836941 - 3838389 | 54104.6 |
| type vi secretion system tip protein vgrg | C9343_19170 | Not Available | Positive | 3839126 - 3841027 | 71393.0 |
| duf1795 domain-containing protein | C9343_19175 | Not Available | Positive | 3841055 - 3841516 | 17319.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





