Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit c | C9343_19020 | Not Available | Negative | 3802459 - 3803205 | 27894.1 |
| 1,2-phenylacetyl-coa epoxidase subunit b | C9343_19025 | Not Available | Negative | 3803214 - 3803501 | 10944.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | C9343_19030 | Not Available | Negative | 3803513 - 3804442 | 35487.2 |
| phenylacetic acid degradation bifunctional protein paaz | C9343_19035 | Not Available | Positive | 3804726 - 3806771 | 72918.6 |
| primary-amine oxidase | C9343_19040 | Not Available | Positive | 3807019 - 3809292 | 84349.2 |
| aldehyde dehydrogenase family protein | C9343_19045 | Not Available | Negative | 3809351 - 3810850 | 53722.2 |
| duf1318 domain-containing protein | C9343_19055 | Not Available | Negative | 3812163 - 3812489 | 11908.5 |
| ynbe family lipoprotein | C9343_19060 | Not Available | Negative | 3812497 - 3812682 | 6826.49 |
| ydbh family protein | C9343_19065 | Not Available | Negative | 3812679 - 3815318 | 96856.3 |
| 2-hydroxyacid dehydrogenase | C9343_19070 | Not Available | Positive | 3815526 - 3816515 | 36522.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





