Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | C9343_18755 | Not Available | Positive | 3756357 - 3757514 | 44081.5 |
| hypothetical protein | C9343_18775 | Not Available | Negative | 3758777 - 3758836 | 2293.74 |
| hypothetical protein | C9343_18780 | Not Available | Positive | 3758837 - 3758899 | 2421.92 |
| transketolase | C9343_18785 | Not Available | Negative | 3759146 - 3761137 | 72215.7 |
| metalloprotease | C9343_18790 | Not Available | Positive | 3761415 - 3762173 | 26902.9 |
| agmatinase | C9343_18795 | Not Available | Negative | 3762379 - 3763299 | 33558.9 |
| hypothetical protein | C9343_18800 | Not Available | Negative | 3763435 - 3764166 | 26342.7 |
| arginine decarboxylase | C9343_18805 | Not Available | Negative | 3764312 - 3766288 | 73890.6 |
| virulence promoting factor | C9343_18810 | Not Available | Negative | 3766297 - 3766428 | 4847.02 |
| hypothetical protein | C9343_18815 | Not Available | Positive | 3766564 - 3766779 | 8114.98 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





