Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2545 family protein | C9343_18385 | Not Available | Negative | 3673986 - 3674228 | 8923.5 |
| lipid a biosynthesis palmitoleoyltransferase | C9343_18390 | Not Available | Positive | 3674581 - 3675501 | 35495.5 |
| membrane protein ypdk | C9343_18395 | Not Available | Positive | 3675857 - 3675928 | 2704.57 |
| glutamate--pyruvate aminotransferase alac | C9343_18400 | Not Available | Negative | 3675993 - 3677231 | 46218.8 |
| sensor histidine kinase | C9343_18405 | Not Available | Positive | 3677607 - 3679304 | 62661.3 |
| dna-binding response regulator | C9343_18410 | Not Available | Positive | 3679319 - 3680053 | 28722.6 |
| arac family transcriptional regulator | C9343_18415 | Not Available | Positive | 3680066 - 3680923 | 32416.5 |
| phosphoenolpyruvate--protein phosphotransferase | C9343_18420 | Not Available | Negative | 3680926 - 3683421 | 92193.4 |
| aminopeptidase ypde | C9343_18425 | Not Available | Negative | 3683446 - 3684483 | 37411.1 |
| aminopeptidase | C9343_18430 | Not Available | Negative | 3684483 - 3685568 | 39552.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





