Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide permease d | C9343_17000 | Not Available | Positive | 3447321 - 3448802 | 54148.1 |
| deoxyribodipyrimidine photo-lyase | C9343_17005 | Not Available | Negative | 3448844 - 3450262 | 53674.9 |
| duf1722 domain-containing protein | C9343_17010 | Not Available | Negative | 3450259 - 3450768 | 20212.4 |
| hypothetical protein | C9343_17015 | Not Available | Positive | 3450807 - 3451043 | 9221.21 |
| isas1 family transposase | C9343_17020 | Not Available | Negative | 3451195 - 3452280 | 40921.2 |
| hypothetical protein | C9343_17030 | Not Available | Negative | 3452936 - 3453505 | 21992.5 |
| hypothetical protein | C9343_17040 | Not Available | Negative | 3455053 - 3455379 | 12558.1 |
| rhs repeat-associated core domain-containing protein | C9343_17045 | Not Available | Negative | 3455379 - 3455980 | 22328.4 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C9343_17050 | Not Available | Negative | 3456071 - 3456616 | 21204.4 |
| trk system potassium uptake protein trkh | C9343_17055 | Not Available | Negative | 3456628 - 3458079 | 52962.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





