Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | C9343_16635 | Not Available | Negative | 3371643 - 3372533 | 33104.5 |
| bifunctional aspartokinase ii/homoserine dehydrogenase ii | C9343_16640 | Not Available | Negative | 3372882 - 3375314 | 88892.8 |
| cystathionine gamma-synthase | C9343_16645 | Not Available | Negative | 3375317 - 3376477 | 41552.8 |
| met repressor | C9343_16650 | Not Available | Positive | 3376754 - 3377071 | 12141.4 |
| yiix family permuted papain-like enzyme | C9343_16655 | Not Available | Positive | 3377255 - 3377863 | 23138.9 |
| hypothetical protein | C9343_16665 | Not Available | Negative | 3378856 - 3379092 | 8624.59 |
| duf4329 domain-containing protein | C9343_16670 | Not Available | Negative | 3379094 - 3379668 | 21436.9 |
| hypothetical protein | C9343_16675 | Not Available | Positive | 3379669 - 3380507 | 31902.3 |
| lyase | C9343_16680 | Not Available | Positive | 3380528 - 3381370 | 31875.3 |
| type iv secretion protein rhs | C9343_16690 | Not Available | Positive | 3381997 - 3382356 | 13152.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





