Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4186 domain-containing protein | C9343_15405 | Not Available | Negative | 3147693 - 3148052 | 13546.6 |
| glutaminase 2 | C9343_15410 | Not Available | Negative | 3148052 - 3148978 | 33517.6 |
| succinate-semialdehyde dehydrogenase | C9343_15415 | Not Available | Negative | 3149042 - 3150430 | 49647.6 |
| lysr family transcriptional regulator | C9343_15420 | Not Available | Positive | 3150531 - 3151412 | 32436.8 |
| putative protein ynek | C9343_15425 | Not Available | Positive | 3151490 - 3152605 | 42912.7 |
| sugar efflux transporter | C9343_15430 | Not Available | Positive | 3152755 - 3153945 | 42540.8 |
| naat family transporter marc | C9343_15435 | Not Available | Negative | 3153970 - 3154635 | 23618.7 |
| xre family transcriptional regulator | C9343_15440 | Not Available | Negative | 3154756 - 3155040 | 10207.5 |
| type ii toxin-antitoxin system rele/pare family toxin | C9343_15445 | Not Available | Negative | 3155030 - 3155350 | 12265.0 |
| multiple antibiotic resistance transcriptional regulator marr | C9343_15450 | Not Available | Positive | 3155569 - 3156003 | 16070.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





