Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | C9343_15280 | Not Available | Negative | 3119708 - 3119887 | 6238.2 |
| molecular chaperone osmy | C9343_15285 | Not Available | Negative | 3119996 - 3120601 | 21065.9 |
| peptide chain release factor 3 | C9343_15290 | Not Available | Negative | 3120994 - 3122580 | 59343.3 |
| damage-inducible protein dini | C9343_15295 | Not Available | Positive | 3122800 - 3123048 | 9365.11 |
| duf4376 domain-containing protein | C9343_15300 | Not Available | Negative | 3123373 - 3123767 | 14661.3 |
| serine/threonine protein kinase | C9343_15325 | Not Available | Negative | 3126611 - 3127933 | 49278.6 |
| type ii toxin-antitoxin system antitoxin hipb | C9343_15330 | Not Available | Negative | 3127933 - 3128199 | 10016.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9343_15335 | Not Available | Negative | 3128422 - 3129822 | 50541.7 |
| autoinducer-2 kinase | C9343_15345 | Not Available | Negative | 3134344 - 3135936 | 57561.0 |
| transcriptional regulator lsrr | C9343_15350 | Not Available | Negative | 3136015 - 3136968 | 33800.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





