Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity potassium transport system protein kup | C9343_15030 | Not Available | Positive | 3064935 - 3066803 | 69298.3 |
| d-ribose pyranase | C9343_15035 | Not Available | Positive | 3066970 - 3067389 | 15284.4 |
| ribose import atp-binding protein rbsa | C9343_15040 | Not Available | Positive | 3067397 - 3068902 | 55015.0 |
| ribose abc transporter permease | C9343_15045 | Not Available | Positive | 3068907 - 3069872 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | C9343_15050 | Not Available | Positive | 3069897 - 3070787 | 30940.2 |
| ribokinase | C9343_15055 | Not Available | Positive | 3070913 - 3071842 | 32292.4 |
| ribose operon repressor | C9343_15060 | Not Available | Positive | 3071846 - 3072838 | 36614.1 |
| dha2 family efflux mfs transporter permease subunit | C9343_15065 | Not Available | Negative | 3072804 - 3074231 | 51445.9 |
| fadr family transcriptional regulator | C9343_15070 | Not Available | Negative | 3074254 - 3074946 | 26063.5 |
| molecular chaperone dnaj | C9343_15075 | Not Available | Negative | 3075527 - 3076657 | 41102.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





