Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc uptake system membrane protein znub | C9343_14620 | Not Available | Negative | 2978773 - 2979558 | 27730.4 |
| zinc abc transporter atp-binding protein znuc | C9343_14625 | Not Available | Negative | 2979555 - 2980310 | 27878.3 |
| zinc abc transporter substrate-binding protein znua | C9343_14630 | Not Available | Positive | 2980389 - 2981321 | 33779.2 |
| murein dd-endopeptidase mepm | C9343_14635 | Not Available | Positive | 2981337 - 2982659 | 49060.6 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C9343_14640 | Not Available | Positive | 2982779 - 2983750 | 37412.5 |
| pyruvate kinase ii | C9343_14645 | Not Available | Negative | 2983881 - 2985323 | 51360.3 |
| murr/rpir family transcriptional regulator | C9343_14650 | Not Available | Negative | 2985451 - 2986320 | 31959.3 |
| glucose-6-phosphate 1-dehydrogenase | C9343_14655 | Not Available | Positive | 2986658 - 2988133 | 55707.5 |
| phosphogluconate dehydratase | C9343_14660 | Not Available | Positive | 2988368 - 2990179 | 64628.9 |
| khg/kdpg aldolase | C9343_14665 | Not Available | Positive | 2990216 - 2990857 | 22285.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





