Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2238 domain-containing protein | C9343_14170 | Not Available | Positive | 2891982 - 2892611 | 23352.4 |
| melibiose:sodium transporter melb | C9343_14175 | Not Available | Negative | 2892750 - 2894171 | 52613.4 |
| alpha-glucosidase/alpha-galactosidase | C9343_14180 | Not Available | Negative | 2894274 - 2895629 | 50658.9 |
| melibiose operon regulatory protein | C9343_14185 | Not Available | Positive | 2895912 - 2896820 | 34929.9 |
| arginine decarboxylase | C9343_14190 | Not Available | Positive | 2897019 - 2899286 | 84443.9 |
| transcriptional regulator | C9343_14195 | Not Available | Positive | 2899611 - 2900372 | 29022.4 |
| arginine:agmatine antiporter | C9343_14200 | Not Available | Positive | 2900509 - 2901846 | 46845.3 |
| phosphoethanolamine transferase epta | C9343_14205 | Not Available | Positive | 2901950 - 2903593 | 61598.5 |
| two-component system response regulator basr | C9343_14210 | Not Available | Positive | 2903590 - 2904258 | 25002.3 |
| two-component sensor histidine kinase | C9343_14215 | Not Available | Positive | 2904268 - 2905359 | 41031.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





