Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide and tripeptide permease c | C9343_14120 | Not Available | Positive | 2881128 - 2882585 | 53057.8 |
| lysine--trna ligase heat inducible | C9343_14125 | Not Available | Positive | 2882822 - 2884339 | 57829.9 |
| ghot/ortt family toxin | C9343_14130 | Not Available | Negative | 2884458 - 2884631 | 6555.44 |
| endoribonuclease ghos | C9343_14135 | Not Available | Negative | 2884659 - 2884955 | 11467.6 |
| n-acetyltransferase | C9343_14140 | Not Available | Negative | 2885182 - 2885454 | 10469.6 |
| 4fe-4s mono-cluster protein yjdi | C9343_14145 | Not Available | Negative | 2885466 - 2885696 | 8650.47 |
| sensor histidine kinase | C9343_14150 | Not Available | Positive | 2885877 - 2887508 | 60554.4 |
| two-component system response regulator dcur | C9343_14155 | Not Available | Positive | 2887505 - 2888224 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | C9343_14160 | Not Available | Positive | 2888795 - 2890135 | 47938.2 |
| fumarate hydratase class i, anaerobic | C9343_14165 | Not Available | Positive | 2890213 - 2891859 | 60078.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





