Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid transaminase | C9343_13470 | Not Available | Positive | 2759545 - 2760738 | 43524.2 |
| hypothetical protein | C9343_13475 | Not Available | Negative | 2761240 - 2761443 | 7888.61 |
| hypothetical protein | C9343_13480 | Not Available | Negative | 2761721 - 2761782 | 2293.74 |
| argininosuccinate synthase | C9343_13490 | Not Available | Negative | 2762986 - 2764329 | 49949.4 |
| Trna-met | Not Available | Not Available | Positive | 2764677 - 2764753 | Not Available |
| ribosome maturation factor | C9343_13500 | Not Available | Positive | 2764960 - 2765412 | 16651.9 |
| transcription termination/antitermination protein nusa | C9343_13505 | Not Available | Positive | 2765440 - 2766927 | 54874.0 |
| translation initiation factor if-2 | C9343_13510 | Not Available | Positive | 2766952 - 2769624 | 97355.5 |
| 30s ribosome-binding factor rbfa | C9343_13515 | Not Available | Positive | 2769788 - 2770189 | 15155.4 |
| trna pseudouridine(55) synthase trub | C9343_13520 | Not Available | Positive | 2770189 - 2771133 | 35089.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





