Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | C9343_13255 | Not Available | Positive | 2708416 - 2710017 | 60320.9 |
| isocitrate lyase | C9343_13260 | Not Available | Positive | 2710047 - 2711351 | 47524.1 |
| hypothetical protein | C9343_13265 | Not Available | Positive | 2711450 - 2711656 | 7822.71 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | C9343_13270 | Not Available | Positive | 2711632 - 2713368 | 67688.4 |
| shet2/espl2 family type iii secretion system effector toxin | C9343_13275 | Not Available | Negative | 2713337 - 2714911 | 60119.4 |
| glyoxylate bypass operon transcriptional repressor iclr | C9343_13280 | Not Available | Negative | 2715228 - 2716052 | 29741.1 |
| methionine synthase | C9343_13285 | Not Available | Positive | 2716252 - 2719935 | 136051.0 |
| na/pi cotransporter family protein | C9343_13290 | Not Available | Positive | 2720155 - 2721786 | 59470.7 |
| dipeptidase pepe | C9343_13295 | Not Available | Negative | 2721876 - 2722565 | 24629.7 |
| 23s rrna pseudouridine(2604) synthase rluf | C9343_13300 | Not Available | Positive | 2722777 - 2723649 | 32434.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





