Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsp | C9343_13095 | Not Available | Positive | 2677266 - 2678678 | 51861.2 |
| ygiq family radical sam protein | C9343_13100 | Not Available | Positive | 2678789 - 2681008 | 83429.4 |
| lipoprotein yqhh | C9343_13105 | Not Available | Negative | 2681051 - 2681308 | 9573.62 |
| duf3828 domain-containing protein | C9343_13110 | Not Available | Negative | 2681359 - 2682285 | 35025.1 |
| 2,5-diketo-d-gluconic acid reductase a | C9343_13115 | Not Available | Negative | 2682485 - 2683312 | 31111.4 |
| alcohol dehydrogenase | C9343_13120 | Not Available | Negative | 2683417 - 2684580 | 42099.4 |
| arac family transcriptional regulator | C9343_13125 | Not Available | Positive | 2684717 - 2685673 | 36030.9 |
| deda family protein | C9343_13130 | Not Available | Negative | 2685713 - 2686372 | 24163.4 |
| cystathionine beta-lyase | C9343_13135 | Not Available | Negative | 2686512 - 2687699 | 43219.8 |
| biopolymer transporter exbb | C9343_13140 | Not Available | Positive | 2687951 - 2688685 | 26289.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





