Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsn | C9343_12930 | Not Available | Negative | 2644843 - 2645802 | 35795.2 |
| transcriptional regulator | C9343_12935 | Not Available | Negative | 2645894 - 2646919 | 37822.1 |
| primosomal protein n' | C9343_12940 | Not Available | Negative | 2647075 - 2649273 | 81605.5 |
| 50s ribosomal protein l31 | C9343_12945 | Not Available | Positive | 2649476 - 2649688 | 7871.49 |
| type iv secretion protein rhs | C9343_12950 | Not Available | Positive | 2649848 - 2649925 | 2554.02 |
| fimbrial biogenesis outer membrane usher protein | C9343_12960 | Not Available | Negative | 2650334 - 2652832 | 93256.1 |
| fimbrial-like protein | C9343_12965 | Not Available | Negative | 2652892 - 2653443 | 19394.0 |
| accessory factor ubik family protein | C9343_12970 | Not Available | Negative | 2653727 - 2654017 | 11276.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | C9343_12975 | Not Available | Positive | 2654391 - 2655044 | 23354.9 |
| zinc transporter zupt | C9343_12980 | Not Available | Negative | 2655534 - 2656307 | 26486.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





