Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | C9343_12775 | Not Available | Negative | 2615795 - 2616109 | 12293.6 |
| rhamnulose-1-phosphate aldolase | C9343_12780 | Not Available | Negative | 2616119 - 2616943 | 30137.2 |
| l-rhamnose isomerase | C9343_12785 | Not Available | Negative | 2617185 - 2618444 | 47097.8 |
| rhamnulokinase | C9343_12790 | Not Available | Negative | 2618441 - 2619910 | 54139.2 |
| transcriptional activator rhas | C9343_12795 | Not Available | Positive | 2620198 - 2621034 | 32331.2 |
| hth-type transcriptional activator rhar | C9343_12800 | Not Available | Positive | 2621018 - 2621956 | 35670.4 |
| l-rhamnose/proton symporter rhat | C9343_12805 | Not Available | Negative | 2621953 - 2622987 | 37346.2 |
| superoxide dismutase | C9343_12810 | Not Available | Positive | 2623272 - 2623892 | 23110.2 |
| 2-keto-3-deoxygluconate permease | C9343_12815 | Not Available | Positive | 2624152 - 2625135 | 33655.4 |
| 6-n-hydroxylaminopurine resistance protein | C9343_12820 | Not Available | Positive | 2625284 - 2625958 | 25344.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





