Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-selenocysteinyl-trna(sec) synthase | C9343_12355 | Not Available | Positive | 2527575 - 2528966 | 50610.2 |
| selenocysteinyl-trna-specific translation elongation factor selb | C9343_12360 | Not Available | Positive | 2528963 - 2530807 | 68847.5 |
| alcohol dehydrogenase | C9343_12365 | Not Available | Positive | 2530997 - 2532148 | 40353.7 |
| aldehyde dehydrogenase | C9343_12370 | Not Available | Positive | 2532313 - 2533851 | 56325.5 |
| duf3302 domain-containing protein | C9343_12380 | Not Available | Positive | 2534396 - 2534719 | 12404.2 |
| hlyd family secretion protein | C9343_12385 | Not Available | Positive | 2534725 - 2535861 | 41785.6 |
| lysr family transcriptional regulator | C9343_12390 | Not Available | Negative | 2535858 - 2536832 | 37285.5 |
| l-ribulose-5-phosphate 4-epimerase sgbe | C9343_12405 | Not Available | Negative | 2538043 - 2538738 | 25562.3 |
| l-ribulose-5-phosphate 3-epimerase | C9343_12410 | Not Available | Negative | 2538732 - 2539592 | 32425.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase sgbh | C9343_12415 | Not Available | Negative | 2539585 - 2540247 | 23446.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





