Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translocation and assembly module tama | C9343_12195 | Not Available | Positive | 2493076 - 2494809 | 64799.7 |
| autotransporter assembly complex protein tamb | C9343_12200 | Not Available | Positive | 2494806 - 2498585 | 136852.0 |
| gamma-glutamylcyclotransferase ytfp | C9343_12205 | Not Available | Positive | 2498588 - 2498929 | 12867.2 |
| antitoxin chps | C9343_12210 | Not Available | Positive | 2499141 - 2499392 | 9272.12 |
| type ii toxin-antitoxin system chpb family toxin | C9343_12215 | Not Available | Positive | 2499386 - 2499736 | 12512.2 |
| inorganic pyrophosphatase | C9343_12220 | Not Available | Negative | 2499813 - 2500343 | 19732.6 |
| abc transporter substrate-binding protein | C9343_12225 | Not Available | Positive | 2500653 - 2501609 | 34332.5 |
| sugar abc transporter atp-binding protein | C9343_12230 | Not Available | Positive | 2501686 - 2503188 | 55319.6 |
| abc transporter permease | C9343_12235 | Not Available | Positive | 2503202 - 2504224 | 35546.1 |
| abc transporter permease | C9343_12240 | Not Available | Positive | 2504211 - 2505206 | 35008.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





