Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-serine/d-alanine/glycine transporter | C9343_12140 | Not Available | Positive | 2481805 - 2483217 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | C9343_12145 | Not Available | Negative | 2483262 - 2483924 | 24831.0 |
| dmt family transporter | C9343_12150 | Not Available | Negative | 2484032 - 2484997 | 35249.6 |
| sdr family oxidoreductase | C9343_12155 | Not Available | Negative | 2485105 - 2485965 | 29804.3 |
| transcriptional regulator | C9343_12160 | Not Available | Positive | 2486054 - 2486434 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | C9343_12165 | Not Available | Negative | 2486552 - 2488495 | 70910.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9343_12170 | Not Available | Positive | 2488685 - 2489425 | 27210.4 |
| ytfj family protein | C9343_12175 | Not Available | Negative | 2489415 - 2489972 | 20617.9 |
| duf1107 domain-containing protein | C9343_12180 | Not Available | Positive | 2490297 - 2490503 | 8072.24 |
| hlyc/corc family transporter | C9343_12185 | Not Available | Negative | 2490565 - 2491908 | 49783.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





