Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | C9343_12090 | Not Available | Negative | 2472620 - 2473096 | 17476.3 |
| fad-binding protein | C9343_12095 | Not Available | Negative | 2473117 - 2475198 | 76111.4 |
| acyl coa:acetate/3-ketoacid coa transferase | C9343_12100 | Not Available | Negative | 2475195 - 2476736 | 55555.7 |
| enoyl-coa hydratase/isomerase family protein | C9343_12105 | Not Available | Negative | 2476746 - 2477522 | 28563.5 |
| sugar phosphate isomerase/epimerase | C9343_12110 | Not Available | Negative | 2477532 - 2478374 | 30997.0 |
| 3-ketoacyl-acp reductase | C9343_12115 | Not Available | Negative | 2478384 - 2479175 | 28449.4 |
| tetr/acrr family transcriptional regulator | C9343_12120 | Not Available | Positive | 2479388 - 2480035 | 24757.7 |
| hypothetical protein | C9343_12125 | Not Available | Negative | 2480019 - 2480657 | 23536.9 |
| peptidylprolyl isomerase | C9343_12130 | Not Available | Positive | 2480716 - 2480862 | 5494.88 |
| peptidylprolyl isomerase | C9343_12135 | Not Available | Positive | 2480876 - 2481496 | 22216.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





