Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family reductase | C9343_10070 | Not Available | Positive | 2098332 - 2098688 | 13515.2 |
| succinyl-diaminopimelate desuccinylase | C9343_10075 | Not Available | Positive | 2098692 - 2099819 | 41271.4 |
| ypfn family protein | C9343_10080 | Not Available | Positive | 2099847 - 2100047 | 8071.78 |
| esterase | C9343_10085 | Not Available | Negative | 2100157 - 2100855 | 24829.4 |
| trna(met) cytidine acetyltransferase | C9343_10090 | Not Available | Negative | 2100929 - 2102944 | 74846.6 |
| neutral zinc metallopeptidase | C9343_10095 | Not Available | Negative | 2102959 - 2103822 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C9343_10100 | Not Available | Negative | 2103990 - 2104703 | 26996.5 |
| outer membrane protein assembly factor bamc | C9343_10105 | Not Available | Negative | 2104916 - 2105950 | 36860.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C9343_10110 | Not Available | Negative | 2105967 - 2106845 | 31285.9 |
| glycine cleavage system transcriptional repressor | C9343_10115 | Not Available | Positive | 2106991 - 2107563 | 20769.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





