Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296365 bp
Thymine Count
1293300 bp
Guanine Count
1317513 bp
Cytosine Count
1312638 bp
Genome Length
5233962 bp
Protein-coding Genes
4736 genes
Non-Coding Genes
441 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit beta | C9343_08815 | Not Available | Positive | 1842896 - 1844284 | 48726.0 |
| ai-2e family transporter | C9343_08820 | Not Available | Negative | 1844309 - 1845343 | 37575.3 |
| hypothetical protein | C9343_08825 | Not Available | Positive | 1845478 - 1845648 | 6483.71 |
| multidrug/spermidine efflux smr transporter subunit mdtj | C9343_08830 | Not Available | Positive | 1845755 - 1846120 | 13115.7 |
| spermidine export protein mdti | C9343_08835 | Not Available | Positive | 1846107 - 1846436 | 11720.8 |
| serine protease | C9343_08840 | Not Available | Negative | 1846475 - 1847296 | 29252.6 |
| hypothetical protein | C9343_08845 | Not Available | Negative | 1847396 - 1847479 | 3206.2 |
| acid shock protein | C9343_08850 | Not Available | Negative | 1847572 - 1847907 | 11568.0 |
| mfs transporter | C9343_08855 | Not Available | Negative | 1848304 - 1849557 | 45260.2 |
| lysr family transcriptional regulator | C9343_08860 | Not Available | Positive | 1849664 - 1850557 | 33313.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





